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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55715821, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLGALRLR GLALRSSQGR PSSAGLREGQ ESPPSPPEWK DRAETVIIGG GCVGVSLAYH  60
   61 LAKAGMRDVV LLEKSELTAG STWHAAGLTT YFHPGINLKK IHYDSIKLYE RLEEETGQVV 120
  121 GFHQPGSIRL ATTPERVDEF KYQMTRTNWH ATEQYIIEPE KIHELFPLLN MDKILAGLYN 180
  181 PGDGHIDPYS LTMALATGAR KYGALLKYPA PVTSLKPRPD GTWDVETPQG SVRANRIVNA 240
  241 AGFWAREVGK MIGLDHPLIP VQHQYVITST IPEVKALKRE LPVLRDLEGS YYLRQERDGL 300
  301 LFGPYESQEK MKLQASWVAH GVPPGFGKEL FESDLDRITE HVEAAMEMVP VLKKADIINI 360
  361 VNGPITYSPD ILPMVGPHQG VRNYWVAIGF GYGIIHAGGV GTYLSDWILH GEPPFDLIEL 420
  421 DPNRYGKWTT TQYTEAKARE SYGFNNIVGY PKEERFAGRP TQRVSGLYKI LESKCSMGFH 480
  481 AGWEQPHWFY KPGQDTQYRP SFRRTNWFEP VGSEYKQVMQ RVGVIDLSPF GKFNIKGQDS 540
  541 TQLLDHLCAN VIPKVGFTNI SHMLTPRGRV YAELTVSHQS PGEFLLITGS GSELHDLRWI 600
  601 EEAAVRGGYD VEIRNITDEL GVLGVAGPYA RRVLQKLTSE DLSDDVFKFL QTKSLKISDI 660
  661 PVTAIRISYT GELGWELYHR REDSAALYER IMNAGQEEGI DNFGTYALNA LRLEKAFRAW 720
  721 GSEMNCDTNP LEAGLDYFIK LNKPANFTGK QALKQIKAKG LKRRLVCLTL ATDNVDPEGN 780
  781 ESVWYKGKVI GNTTSGSYSY SIQKSLAFAY VPVELSEVGQ QVEVELLGKN YPATIIQEPL 840
  841 VLTEPTRTRL QKDGRKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle