YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109463506, gi...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALCDPPGA PGPPGPAPAT HGPAPLSAQE LSQEIKAFLT GADPILGHQL SAREHARCSL  60
   61 LLLRSLPPAR AAVLDHLRGV FDESVRAHLA ALEESPVAGP PHLRPPPSSH VPAGGPGLED 120
  121 VVHEVQQVLC EFIRANPKAW APVISAWSID LMGQLSSTYS GQHQRVPHAT GSLNELLQLW 180
  181 MGCRATRTLM DIYVQCLSAL IGSCPDACVD ALLDTSVQHS PHFDWVVAHI GSSFPGTIIS 240
  241 RVLSCGLKDF CVHSGAGGGA SACGGSSSQT PSSDPFPGSP AIPGEKRVPK IASVVGILGH 300
  301 LASRHGDSIR RELLRMFHDS LSGGTGGRNG EPSLQATVPF LLQLAVMSPA LLGTVSGELV 360
  361 DCLKPPAVLS QLQQHLQGFP REELDNMLNL AVHLVSQASG TGAYRLLQFL VDTAMPASVI 420
  421 TTQGLAVPDT VREACDRLIQ LLLLHLQKLV HHRGGSPGEG VLGPPPPPRP VPFLDALRNH 480
  481 VGELCGETLR LERKRFLWQH QLLGLLSVYT RPSCGPEALG HLLSRARSPE ELSLATQLYA 540
  541 GLVVSLSGLL PLAFRSCLAR VHAGTLQPPF TARLLRNLAL LVGWEQQGGE GPSTLGARFG 600
  601 ESASAHLSDL APLLLHPEEE VAEAAASLLA ICPFPSEALS PSQLLGLVRA GVHRFFASLR 660
  661 LHGPPGVASA SQLLTRLSQT SPAGLKAVLQ LLVEGALHRG NTELFGGEMD GDNETLSIVS 720
  721 TPLASASLLD INRRHTAAVP GPGGIWSVFH AGVIGRGLKP PKIVQSRNHQ EVIYNTQSLV 780
  781 NLLVHCCSAS GSNEREGCWG APTLSPEAAK AVAVTLVESV CPDAAGAELA WPPEDHARAT 840
  841 VERDLRIGRR FREQPLLFEL LKLVAAAPPA LCYCSVLLRG LLAALLSHWE ASRHPDTTHS 900
  901 PWHLEASCIL VAVMAEGSLL PPALGNMHEV FSQLAPFEVR LLLLSVWGFL REHGPLPQKF 960
  961 IFQSERGRFI RDFSREGGGE GGPHLSVLHS VLHRNIDRLG LFSGRFQAPP PSTLLRQGT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle