YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FUCO2_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLGLLMFLP LLLLATRYRA VTALSYDPTW ESLDRRPLPA WFDQAKFGIF IHWGVFSVPS  60
   61 FGSEWFWWYW QKERRPKFVD FMDNNYPPGF KYEDFGVLFT AKYFNANQWA DLLQASGAKY 120
  121 VVLTSKHHEG FTLWGSAHSW NWNAVDEGPK RDIVKELEVA VRNRTDLHFG LYYSLFEWFH 180
  181 PLFLEDQSSA FQKQRFPVAK TLPELYELVT KYQPEVLWSD GDGGAPDHYW NSTDFLAWLY 240
  241 NESPVRDTVV TNDRWGAGSI CKHGGYYTCS DRYNPGHLLP HKWENCMTID KFSWGYRREA 300
  301 EIGDYLTIEE LVKQLVETVS CGGNLLMNIG PTLDGIIPVI FEERLRQMGT WLKVNGEAIY 360
  361 ETHTWRSQND TVTPDVWYTS KPEKKLVYAI FLKWPISGKL FLGQPIGSLG ETEVELLGHG 420
  421 RPLTWTSSKP SGIVVELPRL SVHQMPCKWG WTLALTNVT

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	459	0.92