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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|293690, gi|33...
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGPLSSLPT FAFSPRYLSR KEDPKKRQAA CLLRPPSRAA SPRLRGLDMG LLQVFAFGVL  60
   61 ALWGTRVCAQ EPEFSYGCAE GSCYPATGDL LIGRAQKLSV TSTCGLHKPE PYCIVSHLQE 120
  121 DKKCFICDSR DPYHETLNPD SHLIENVVTT FAPNRLKIWW QSENGVENVT IQLDLEAEFH 180
  181 FTHLIMTFKT FRPAAMLIER SSDFGKTWGV YRYFAYDCES SFPGISTGPM KKVDDIICDS 240
  241 RYSDIEPSTE GEVIFRALDP AFKIEDPYSP RIQNLLKITN LRIKFVKLHT LGDNLLDSRM 300
  301 EIREKYYYAV YDMVVRGNCF CYGHASECAP VDGVNEEVEG MVHGHCMCRH NTKGLNCELC 360
  361 MDFYHDLPWR PAEGRNSNAC KKCNCNEHSS SCHFDMAVFL ATGNVSGGVC DNCQHNTMGR 420
  421 NCEQCKPFYF QHPERDIRDP NLCEPCTCDP AGSENGGICD GYTDFSVGLI AGQCRCKLHV 480
  481 EGERCDVCKE GFYDLSAEDP YGCKSCACNP LGTIPGGNPC DSETGYCYCK RLVTGQRCDQ 540
  541 CLPQHWGLSN DLDGCRPCDC DLGGALNNSC SEDSGQCSCL PHMIGRQCNE VESGYYFTTL 600
  601 DHYIYEAEEA NLGPGVVVVE RQYIQDRIPS WTGPGFVRVP EGAYLEFFID NIPYSMEYEI 660
  661 LIRYEPQLPD HWEKAVITVQ RPGKIPASSR CGNTVPDDDN QVVSLSPGSR YVVLPRPVCF 720
  721 EKGMNYTVRL ELPQYTASGS DVESPYTFID SLVLMPYCKS LDIFTVGGSG DGEVTNSAWE 780
  781 TFQRYRCLEN SRSVVKTPMT DVCRNIIFSI SALIHQTGLA CECDPQGSLS SVCDPNGGQC 840
  841 QCRPNVVGRT CNRCAPGTFG FGPNGCKPCD CHLQGSASAF CDAITGQCHC FQGIYARQCD 900
  901 RCLPGYWGFP SCQPCQCNGH ALDCDTVTGE CLSCQDYTTG HNCERCLAGY YGDPIIGSGD 960
  961 HCRPCPCPDG PDSGRQFARS CYQDPVTLQL ACVCDPGYIG SRCDDCASGF FGNPSDFGGS1020
 1021 CQPCQCHHNI DTTDPEACDK DTGRCLKCLY HTEGDHCQLC QYGYYGDALR QDCRKCVCNY1080
 1081 LGTVKEHCNG SDCHCDKATG QCSCLPNVIG QNCDRCAPNT WQLASGTGCG PCNCNAAHSF1140
 1141 GPSCNEFTGQ CQCMPGFGGR TCSECQELFW GDPDVECRAC DCDPRGIETP QCDQSTGQCV1200
 1201 CVEGVEGPRC DKCTRGYSGV FPDCTPCHQC FALWDAIIGE LTNRTHKFLE KAKALKISGV1260
 1261 IGPYRETVDS VEKKVNEIKD ILAQSPAAEP LKNIGILFEE AEKLTKDVTE KMAQVEVKLT1320
 1321 DTASQSNSTA GELGALQAEA ESLDKTVKEL AEQLEFIKNS DIQGALDSIT KYFQMSLEAE1380
 1381 KRVNASTTDP NSTVEQSALT RDRVEDLMLE RESPFKEQQE EQARLLDELA GKLQSLDLSA1440
 1441 AAQMTCGTPP GADCSESECG GPNCRTDEGE KKCGGPGCGG LVTVAHSAWQ KAMDFDRDVL1500
 1501 SALAEVEQLS KMVSEAKVRA DEAKQNAQDV LLKTNATKEK VDKSNEDLRN LIKQIRNFLT1560
 1561 EDSADLDSIE AVANEVLKSG NASTPQQLQN LTEDIRERVE TLSQVEVILQ QSAADIARAE1620
 1621 LLLEEAKRAS KSATDVKVTA DMVKEALEEA EKAQVAAEKA IKQADEDIQG TQNLLTSIES1680
 1681 ETAASEETLT NASQRISKLE RNVEELKRKA AQNSGEAEYI EKVVYSVKQN ADDVKKTLDG1740
 1741 ELDEKYKKVE SLIAQKTEES ADARRKAELL QNEAKTLLAQ ANSKLQLLED LERKYEDNQK1800
 1801 YLEDKAQELV RLEGEVRSLL KDISEKVAVY STCL

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