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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45550395, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSKYVLATL LALFAQSMCI QELSLPPEGS HSTAATRSKK AKTAISEDIM YNYLMQFDYL  60
   61 PKSDLETGAL RTEDQLKEAI RSLQSFGNIT VTGEIDSATA RLIQKPRCGV GDRRSADSFS 120
  121 PDNLYHEIGS NVRVRRFALQ GPKWSRTDLT WSCGRTEFEP SNPRLLGLGF RGTEPIENPF 180
  181 ANRPLTQPQQ QQLAGANEQL QLTIFGCLCS SVASKPSKRD DAAIEATKAI AFCHFCDLTP 240
  241 KVAQQNFISS SQYIERNYRA HIYIAMRIYK CVALIDMKES RKKKMGNAKR KEQDHRVQPA 300
  301 EKDVRLLMSA RQSGAFLMGM YLLMGAHRVG KRQRSKKGAI FRCRGRALIF PFGSGKVRGE 360
  361 RGASQHAVVM AKATVFRCSS LAPFRLHLVF SPCHSTRCNF LAFIFVLSAV PDPRAHRISP 420
  421 AFRTHGCCYV TLAVTGAKIC YGHNSEQAKR NGGEDASGKI LKSSDFYACI YELRELGNDI 480
  481 NDIYVTELQH KRRRNGRALT ANRQKVNMQQ TIALYNLKCT SLLQQLHNCH MVNRSMPDAS 540
  541 KVERMVQTAL DVWANHSKLT FREVYSDQAD IQILFARRAH GDGYKFDGPG QVLAHAFYPG 600
  601 EGRGGDAHFD ADETWNFDGE SDDSHGTNFL NVALHELGHS LGLAHSAIPD AVMFPWYQNN 660
  661 EVAGNLPDDD RYGIQQLYGT KEKTWGPYKP QTTTTTTTTT TMRAMIYRAD KPAYWPWNNP 720
  721 SNNPNNDRNR ARERQEEERR RQEKERRRQE EERRHQEEER RRQVEERQRQ EEERWRQEQE 780
  781 RQEEENRRRK IEHKSQWERN PSKERNRPRE RQEMERRRQE QERQEQERQE QEDRRRERER 840
  841 DRQLEWERRN RNGAREPVTP TANTTPRPTN KPYPTVHRQH HHHNKPRKPK PDSCMTYYDA 900
  901 ISIIRGELFI FRGPYLWRIG TSGLYNGYPT EIRRHWSALP ENLTKVDAVY ENKQRQIVFF 960
  961 IGREYYVFNS VMLAPGFPKP LASLGLPPTL THIDASFVWG HNNRTYMTSG TLYWRIDDYT1020
 1021 GQVELDYPRD MSIWSGVGYN IDAAFQYLDG KTYFFKNLGY WEFNDDRMKV AHARAKLSAR1080
 1081 RWMQCARSAN EVDDEQRWTA SLVSEGEETG RSGSRELRIN HFILSILLLA IANWRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle