YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45552070, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANIWPRILV GALTILVAVG YKNYRDLSAP GKRPDLDNNA YWGPTLKEPY RENKAILPFD  60
   61 ISVKPEVIED LIGQLSRPLK AQAPLEGVGF QYGFNANELA KVVKYWRDTY LPKWSEREEY 120
  121 LKKLDHYQTE IQGSSKTGFG VAQVAVVMRN LMLRVGFDKF LVQGGDWGSI IGSNVASLFP 180
  181 ENVLGYHSNM CGNNSPMGQL KMVLASFFPS WFVDSEYADF YKGLGHLFST IMEEMGYAHI 240
  241 QASKPDTIGN ALIDNPTGLA SYILEKFSTW TNTAFRSLPD GGLTKRFTYD QLLDNVMIYY 300
  301 VTNSITTSMR LYSESMVASQ FALAVDSVPI KAKAGCTRFA HEITHFSDSV LANKFPNLVH 360
  361 STHHRDGGHF PAFELPQQLY DDFVSFVQKA NFS

Type	Start	End	Confidence
Signal Peptide	1	20	0.86
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	393	0.99