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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ppk25-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESKMSRPKQ PDWLAELCQE SSIHGMPYIA RRDLHWAERL FWTFIILGSA YYAISSCLNQ  60
   61 WYRFRDNPIV YEYEYLFGLR IFPFVGITLC PRYHDETEIP RLINQTWGVD PSEDKEKAVY 120
  121 YRKFLLAING LRYSTLETLE PFENDTTLDN VNYLNILLTL QKKVIAVKIP PELAPIITEV 180
  181 GLCQTSSQLN RYGNPYGKLE TQDMEPMKQC GYLSNCITSL KPINSIVAPI FMYLHDVEEM 240
  241 MLPDDMRTPS FDAKDIESKD LDIMLHTTSA ESEVRNLPVA YRKCRFSDEN NLQYYSPYHP 300
  301 SLCRLECRIK WALSLCNCKP YFYVAAPEVP ICTVSGMLCL ARSKWLERPC DCYPSCREET 360
  361 FTIFKVSDQT GGDDNYSGER FERTLIINLQ ISRMGINRRV VFSTDQLIMS FGGAIGLFLG 420
  421 ASFMTIYGVV YFFLTFIAYT CKNRFCKRFF F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle