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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0308357, KrT...
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMVDKSSKL VDKFAVISGT GGSGPGGGPL NLQSGGGGGG SGGGGGVSGS GGISGTAGLS  60
   61 AGAGMTTGQK PVPMKLFAAW EVDRTPPNCI PRLCSLTITR LSILTPLPGD TTSLSLAVKM 120
  121 QSSKRTLRSH EIPINGLALT SSASLQGNSP MSVAGGVGGG GVGTPGSVGT GGGLGVAVPL 180
  181 TETELDLHFS LQYPHFIKRD GNRLVILLQR RKKYKSRTIL GYKTLAEGII RMDAVLQKSM 240
  241 DMIIELTASG KNGRPGTVVA CLRAERVSSI PVDHDNKNNN SVLLADRVAE YSDEDEEAEF 300
  301 SSGEFNDEAN ELGLIRGYDP KDPRDYNHPA KHDMRKYRNK LQRSGIEDCA LVGHHPGSIQ 360
  361 HHHPGVVVDS DSEFEMKDKS SSRAKFSRTI SLQQRNFKQK IVALLKRFKV SEELEGESGH 420
  421 RGTAALRGER DLDALFQELE SLSCCEGDDS GPDMDSISVG STPKPSLRPF FTNSRIMLHD 480
  481 NITGNGGDLS QLVGGGLGPG TGTADRGGND SSGNEGNAGY TDGQNSDPQN SPPRDKDYLR 540
  541 LQQMQQQQLT PVSSVAASMG SGSVITPAQT EKRSRLFRTS SNTPANAGSG GNSVSAISAS 600
  601 GGGKRKHTLS LSAEPRSVLE ACLSPTNVEP RKLLLDQLSR VFAGEDSAIP EVVTIISPPE 660
  661 ALGGSALLAK LVTLFANSFK PAFVPQNTAE VKAVLQALMA KIQKYCNSNA KPPHTVKVLL 720
  721 IGGDWLQGAT LRHYVELMGV RPPDWLNHLR FYLVPVGGSC GSVARHLSQM DQAYAVMFGS 780
  781 DNWTQLCERA AATAAAVSAV TTVNATALTT NLADAAGVAK SDIAELVQRI QRYLLAAGPC 840
  841 TQIPIAEAMV NYKDEDSCQI FVPFVSDVRI GYLDAQASLD LEENAAGSNA VGSGLGSGSA 900
  901 SSSAIPIGSQ SSPNVHGVVS GSPPQQQSLG RISPPLQTPP SSASSHRERN TSESLSTPSS 960
  961 VQQQSFSGAL AAAEAVELQV DYWPLVRPGE GHAKESKGGL SKGSDAGGKN SIKSTFRNLQ1020
 1021 VWRLPQHAQQ LGDMFNGLTV SFATKEKKQK QIMRLGKKKD KERDLEKEQC VEGVARLICS1080
 1081 PKQSHPVPLR VYIDGTEWTG VKFFQVSSQW QTHVKNFPIA LIGCTPMSCA ELS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle