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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Csk-PH
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESIAIGFL QYIITINYDD EEAQARKTSH EKSQKPKPKP EENHKEKEAI SRKASGEGDL  60
   61 ITVEIKQGLL RKQTATTTTG QAMNSHATAT QNGQTTVVGH HRGFSQPSVT VAAAAATGST 120
  121 AGDPWFLQTT GHQMPPTAPL RHNKRPAPQP NAVLGAGSSG TAPGSAVGAV LLHQQQLSQS 180
  181 QPHIVPPSIP PHHHHHRENN VHPIQAGAAA ALHLSSHALN SHNLISSASN HSPKSPSQTQ 240
  241 QQQQTTNQQQ QQQQQQASHS ILSTFAPAPT VAAVQPAGSQ SVAGTAAAVA AVAQQQQQQH 300
  301 LQLLANCPPG GAGLMSSSLN AAQMGMHGAE RALPPKSLAL SGSQHGSNML LHTAPQPPQA 360
  361 SQPAAVVGVS GSGSAGMSTS LHSFDINGVT AGSGVNASSA WSSGSTTAMN HASLSPTALA 420
  421 PQQGRSRCEV KLNAMPWFHG SITRDEAEHL LQPREDGLFL VRESTNFPGD YTLCVCFQSK 480
  481 VEHYRVKYLE NKLTIDDEEY FENLGQLVAH YEADADGLCT QLIKCLPKLG KQEFCINSKD 540
  541 FVDKGWVIPE AELQLRESIG KGEFGDVMLG ILRNEKVAVK MLKDEGAVQK FLAEASVMTT 600
  601 LEHDNLVKFI GLVFTSKHLY LVTEYMSKGS LVDYLRSRGR QHITKKDQII FAYDTASGME 660
  661 YLEAKKVVHR DLAARNVLIS EDCVAKVSDF GLAREECYNL DVGKLPIKWT APEALKNGRF 720
  721 SNKSDMWSFG ILLWEIYSFG RVPYPRIPLA DVVKHVEVGY KMEAPEGCPP EIYEMMRQAW 780
  781 DLNPAKRPTF AELKVKLQLL NNATA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle