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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG9270-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYIFSSFALP ILFKGRKKTL EPTDLYNALK EHKAETLGDK FFATWQSEVR SCGDSPKKEP  60
   61 SIIRVILKVF GWQLFLSGIV VGVLELGTRC HLAMKMRVAV STAIYRKALR LSRTALGDTT 120
  121 TGQVVNLISN DLGRFDRALI HFHFLWLGPL ELLISSYFLY QQIGVASLYG IVILLLFLPI 180
  181 QTFLSRLTSR LRHQTALRTD QRVRMMNEII SGIQVIKMYT WEKPFGRLIE RLRRSEMSSI 240
  241 RKVNYIRGTL LSFEITLSRI AIFVSLLGFV LMGGELTAER AFSVTAFYNI LRRTVCKFFP 300
  301 SGMSQFAEMM VTLRRIKGFM MRSETEALYL KGGQTNKLFE GEPLVKLQSF QARWNHDHVE 360
  361 PVLENINISL SPPQLVAVIG PVGSGKSSLI QAILGELPGE SGKLKVQGDI SYASQEPWLF 420
  421 NASVRDNILF GLPMDKHRYR NVIRNCALER DFELLHGDRT FVGERGASLS GGQRARISLA 480
  481 RAVYRQADTY LLDDPLSAVD THVGRHLFEE CMRGFLRDKL VILVTHQLQF LEHADLIVIM 540
  541 DKGKISAVGT YEEMLKSGQD FGKLLATEAQ EMGDSNQEQV NAEGDSRNDK STYSRQSSRV 600
  601 SRVSVTSVDS STESILDNER QPAQESRSQG KIGLGIYGKY FSAGSGWLMV ILVAFFCLGT 660
  661 QILASGGDYF LSYWVKNNDS SSSTDIYIFS GINAALVIFA LLRTLLFFSM AMHSSTQLHN 720
  721 TMFQGVSRTA LYFFHANPSG RILNRFAMDL GQVDEILPAV MLDCIQIFLT ISGIIGVLCI 780
  781 TNPWYLINTI TMFLAFHFLR TFYLSTSRDL KRLEAIARSP MYSHFSATLN GLSTIRAMEA 840
  841 QDLLTKEYDN YQDIHSSGYY TFLSTNRAFG YYLDLFCVAY VISVTLMSYF NPPVDNPGQI 900
  901 GLVITQAMSM TGTVQWGMRQ SAELENSMTS VERVLEYRHL EAEGEFESPD DKKPPMNWPQ 960
  961 EGLISAEQLS LRYNPDPKAD RVLKSLNFII MPREKIGIVG RTGAGKSSLI NALFRLSYNE1020
 1021 GSLVIDNTDI LGIGLHDLRS KISIIPQEPV LFSGTLRCNL DPFEQYADEK LWEALEEVHL1080
 1081 KDEVSELPNG LESVVAEGGS NYSVGQRQLV CLARAILREN RILVMDEATA NVDPQTDALI1140
 1141 QSTIRRKFRD CTVLTIAHRL NTIIDSDRVM VLDAGTLVEF GSPFELLTQS WSKVFYGMVL1200
 1201 QTGRSSFEHL LKLALEAHER RLLSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle