YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0303835, foi...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	258	0.99
Transmembrane Helix	259	282	0.93
Cytoplasmic	283	291	0.83
Transmembrane Helix	292	314	0.90
Non-Cytoplasmic	315	325	0.89
Transmembrane Helix	326	347	0.89
Cytoplasmic	348	604	0.89
Transmembrane Helix	605	626	0.95
Non-Cytoplasmic	627	631	0.88
Transmembrane Helix	632	653	0.88
Cytoplasmic	654	665	0.84
Transmembrane Helix	666	686	0.95
Non-Cytoplasmic	687	706	0.95

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARHIMAVCV VCLLCAHRLH CQDHIESLLG PARVTTHNSQ DQLNARVYTN LSPSSETTDR  60
   61 RQQRSASGDD DTFNYSISPP SRREKRHAGH EHGPTSESRV PQITQYYLEK LMAQDELMNS 120
  121 SGFDGLLQQL SLHSLASGAS EGTCVPGSRL VHHVQPHDHH HAHHHEEEDH SLQLNNCTLI 180
  181 QNGTTSNVIC PSLPNNNTHP LGKEAKNFTL SDKDLLHLCP ILLYELKAQS GGCIEPAILS 240
  241 DIDTTEELLE AEKDKDIFYV WIYAFISVFA CGILGLVGVA IIPFMGSRYY KYIIQYLVAL 300
  301 AVGTMTGDAL LHLLPHSLAG QDERGMIMKG LGCLGGIIFF YVMEHALTMI SEWRKSVEKK 360
  361 ETKKPSRAKV MRDPDSSVNN SVAGDKICKQ KYSSYPYCYD EITMNNKQSE WMHLPFDVAA 420
  421 GAGGDAPSVA ELRNGVGDHD GSNDMAAAAE SLISPLHTNC VEMNHHNHNH KHNSHQQNHE 480
  481 GQDSNTIVTD LDGNAVYAVN KAKDKDSRND HVTVILREHE SSHHGHSHRH GHVHSPPETL 540
  541 SAVAWMIIMG DGLHNFTDGM AIGAAFAENI AGGFSTSLAV FCHELPHELG DFAILIKAGM 600
  601 SVKSAVYYNL LTGVLSFIGM IFGIAFGQSQ DVAQWMFAVA AGLFIYIALV DMMPEISASH 660
  661 KSLGQFLLQI LGMLSGVGIM LLIALYEGDL MSAFGTAGAA SHQHAH