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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: dlp-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHQQQQQQH LHCRRKATAT TTARLVIFSS PLLLLLLTTH LPPTLQADNG PAPQVAALAA  60
   61 PNPAGGVAGS SIIDQFSPNC SAVTHIFQAR GIDAIEIPQK PSNERVLRYC ESPSVGTCCT 120
  121 YNMETRMAMQ SRQQLEGHTK DQISRMSGIL GSKATKFKDI FTALLKESRT QFNSMFIRTY 180
  181 GVIYERNSYV FSDLFKELET YFANGRVDLL EVMDKFFNTL YQKMFTVLNT QYTFDENQNQ 240
  241 KPHFMPVPVA AARISAKMVR RRKKKAKIAP TWLIAPERSP LVSAQLQRFA FIVIVLVCRT 300
  301 CFGTLSFIAI GQQQRQQRCR VIAGTCQPPA PSTLPKNSAH LVIRIFVIAQ MLCGGGKECA 360
  361 DDDVGEVGSG GDGVEPCHLQ VQISAAISTP NENIFPNIPH SFSTDLILFS SYMRCVSEHM 420
  421 KELKPFGDVP DKLSVQIKRS FVATRTYGQA LTTASEVAKK VLNVRLNADC TGALTKMQHC 480
  481 GACKGYTEKP CTNYCVNVIK GCLHYQHEFD SEWENFAMAM DKVAERLLGS FNIVMVVEPL 540
  541 NIKISEAIMN FQDSGQDITN RVFQGCGRPK LKKMKRSISP KLQGVQILNA RSPVEADTLD 600
  601 IDETLDEAIV LRERRAAEPG SQETSAQQSQ EQGVGKSGNG GGGGGGNNRR QQQRRKQQQQ 660
  661 RRKQQNNRDD NDDDDNESGG GREPILDRIV RDIRQRVKDY KKFWSNLPHS VCSNEDIASS 720
  721 SDVDGMCWNG HTIDRYMHSI TTEHGSNPEF TGNPASTKQT AQMASQLSHL KNAIVHLRNA 780
  781 YNGQDVEWSE QEELPYAGSG AGSGSGSEDD EDDDEGSGLG PFEPSHKPDV ERPSVDADND 840
  841 DDEDAGGRGH MPTHTSRPTS GVDDKNPLIH TTHFDQDHND LDEDHRQLDE DEDTDAGHDG 900
  901 ANDNRSSDAP EKMTLRRALV VYLLPLYMAW FGGVCADLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle