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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Muc11A-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTNRSTRLL VLLVLTALVA SHQAHAAAVG LKCGGKSAVC VGPLSYQQCV DDLTTGPVVP  60
   61 CALNTRCVTD GLEICVPVKS AAEAPTAAVA KMVTITDSPV VSESAPLVDS TNSGSGVEIS 120
  121 TEGAPASAVP TKPSIPVETT QAPVETTQIP LETTQVAVET TQIPLETTQA SGETTTAAIE 180
  181 ETTTGSEAPL EPESTVPSDT TPVDSTLAPG WEGTYPTIEP NTPAEDPNAP AGTTLAPGEV 240
  241 DPNSPIDPNS PLDPNAPEES TNEPGLVDPT LPADTTTAPD SPVEGSSAAP GTPADVTTAA 300
  301 PGAPADGSSA APGSPADGSS AAPGSPADVT TAAPGAPADG SSAAPGAPAD GSSAAPGSPA 360
  361 DVTTAAPGAP ADGSSAAPGS PAEGSSAAPG APADVTTAAP GAPADGSSAA PGAPADGSSA 420
  421 APGSPADVTT AAPGAPADGS SAAPGSPAEG SSAAPGAPAD VTTAAPADGS SAAPGSPADV 480
  481 TTAAPGAPAD GSSAAPGAPA DGSSAAPGSP ADVTTAAPGA PADGSSAAPG SPADVTTAAP 540
  541 GAPADGSSAA PADGSSAAPG SPADVTTAAP GAPADGSSAA PGSPAEGSPP AGGSPAGSNV 600
  601 PAGGDPADSN VPAGGAPADS NVPAGGAPAD SNVPAGGAPA DSNVPAGGAP ADANVPAGGA 660
  661 PADSNVPGGG APADANVPAG GAPADSNVPA GGAPAGSNVP AGGAPADSNV PAGGAPADSN 720
  721 VPAGGAPAGS NVPAGSSPGS SVLGPNPPAG SVVPSIPVLP GGAGSWPWHP RPNIPIVPPT 780
  781 WRPLLPGQNG SGAPGSGLIN GIVNPPQRPH PFWPNWQSWV NSWRPTKPVP STEAPVQPQN 840
  841 PQQPQNPQQP GNSNPETAES VEQAAPVPPA NVPASNENAS VEDSNKASSE KSKDKPKSGE 900
  901 DQSKEQEQKK PSSEEKEKDS KEKNDKDSKE KKDNDSKDKK DKSKEEKDNE SQKDNDGDDE 960
  961 PSSKEKKQYV KDLIKKLKKG DECDEDDVYP DVRDCRKYYR CEVKKSGKHK FAHLRCDKKE1020
 1021 RFDWLTQSCV PKDEARCLEK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle