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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: emp-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLDDILHIN NCKADCSSLS TTPNPKTDLV NMNGPKHKFC TKLSSTYLRK WWITIVVAAA  60
   61 LIIGGIVVAC EFTVLIDAVV DRMVALRPGA KTFGWWAKPP VEPRISLYIY NVTNADDFLS 120
  121 NGSKAIVDEV GPYVYSETWE KVNIVENDNG TLSYNLRKIY SFREDLSVGP EDDVVIVPNI 180
  181 PMLSATSQSK HAARFLRLAM ASIMDILKIK PFVQVSVGQL LWGYEDPLLK LAKDVVPKEQ 240
  241 KLPYEEFGLL YGKNGTSSDR VTVNTGVDDI RRYGIIDNFN GRTHLPHWTT DACNTLAGTD 300
  301 GSIFPPHIDH DRILHVYDKD LCRLLPLVFE KEVMTSNEVP GYRFTPPEWV FADVDSHPDN 360
  361 MCFCPAGKPS CSPNGLFNVS LCQYDSPIML SFPHFYLADE SLRTQVEGIS PPMKEKHQFF 420
  421 FDVQPKMGTT LRVRARIQIN LAVSQVFDIK QVANFPDIIF PILWFEEGID NLPDEVTDLM 480
  481 RFAEQVPPKI RVALIVGLCA LGVILLLLST FCLIRNSHRQ STLHLEGSNY LATAQVDMNK 540
  541 KQNKDNQPAR Y

YRC Informatics Platform - Version 3.0
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