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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: robo-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRLHMTQK QRQNDRRCIG SSVESSLQQH QHHKMHPMHP ENHAIARSTS TTNNPSRSRS  60
   61 SRMWLLPAWL LLVLVASNGL PAVRGQYQSP RIIEHPTDLV VKKNEPATLN CKVEGKPEPT 120
  121 IEWFKDGEPV STNEKKSHRV QFKDGALFFY RTMQGKKEQD GGEYWCVAKN RVGQAVSRHA 180
  181 SLQIAVLRDD FRVEPKDTRV AKGETALLEC GPPKGIPEPT LIWIKDGVPL DDLKAMSFGA 240
  241 SSRVRIVDGG NLLISNVEPI DEGNYKCIAQ NLVGTRESSY AKLIVQVKPY FMKEPKDQVM 300
  301 LYGQTATFHC SVGGDPPPKV LWKKEEGNIP VSRARILHDE KSLEISNITP TDEGTYVCEA 360
  361 HNNVGQISAR ASLIVHAPPN FTKRPSNKKV GLNGVVQLPC MASGNPPPSV FWTKEGVSTL 420
  421 MFPNSSHGRQ HVAADGTLQI TDVRQEDEGY YVCSAFSVVD SSTVRVFLQV SSLDERPPPI 480
  481 IQIGPANQTL PKGSVATLPC RATGNPSPRI KWFHDGHAVQ AGNRYSIIQG SSLRVDDLQL 540
  541 SDSGTYTCTA SGERGETSWA ATLTVEKPGS TSLHRAADPS TYPAPPGTPK VLNVSRTSIS 600
  601 LRWAKSQEKP GAVGPIIGYT VEYFSPDLQT GWIVAAQRVG DTQVTISGLT PGTSYVFLVR 660
  661 AENTQGISVP SGLSNTIKTI EADFDAASAN DLSAARTLLT GKSVELIDAS AINASAVRLE 720
  721 WMLHVSADEK YVEGLRIHYK DASVPSAQYH SITVMDASAE SFVVGNLKKY TKYEFFLTPF 780
  781 FETIEGQPSN SKTALTYEDV PSAPPDNIQI GMYNQTAGWV RWTPPPSQHH NGNLYGYKIE 840
  841 VSAGNTMKVL ANMTLNATTT SVLLNNLTTG AVYSVRLNSF TKAGDGPYSK PISLFMDPTH 900
  901 HVHPPRAHPS GTHDGRHEGQ DLTYHNNGNI PPGDINPTTH KKTTDYLSGP WLMVLVCIVL 960
  961 LVLVISAAIS MVYFKRKHQM TKELGHLSVV SDNEITALNI NSKESLWIDH HRGWRTADTD1020
 1021 KDSGLSESKL LSHVNSSQSN YNNSDGGTDY AEVDTRNLTT FYNCRKSPDN PTPYATTMII1080
 1081 GTSSSETCTK TTSISADKDS GTHSPYSDAF AGQVPAVPVV KSNYLQYPVE PINWSEFLPP1140
 1141 PPEHPPPSST YGYAQGSPES SRKSSKSAGS GISTNQSILN ASIHSSSSGG FSAWGVSPQY1200
 1201 AVACPPENVY SNPLSAVAGG TQNRYQITPT NQHPPQLPAY FATTGPGGAV PPNHLPFATQ1260
 1261 RHAASEYQAG LNAARCAQSR ACNSCDALAT PSPMQPPPPV PVPEGWYQPV HPNSHPMHPT1320
 1321 SSNHQIYQCS SECSDHSRSS QSHKRQLQLE EHGSSAKQRG GHHRRRAPVV QPCMESENEN1380
 1381 MLAEYEQRQY TSDCCNSSRE GDTCSCSEGS CLYAEAGEPA PRQMTAKNT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle