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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RN180_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSEESTST QSPEEQTGTL HCWRCRKCIA SSGCFMTPLE TQVVEQDRHE SVDAQNTCHL  60
   61 WHMNVDALPE WISCLLQKAQ WTVGKLNCPF CGARLGGFNF VSTPKCSCGQ LAAVHLCKSR 120
  121 TDHQAAQGGR LMRPALKHLP HPGVPSGCDK ETLLTGGGSK TRNHWLLSMA RNSNGLGRLT 180
  181 EALCLEVRAT YFEMKNEKLL FKASDPKCQP FVPQPDTGRC PSRASHRKSH SLDLNISEKL 240
  241 ILLPTLYEIH RKPTAYPRLN ETGPIDLSGL ALPCSNSSCS FQSPPSFDPN MLLHRLSVAP 300
  301 HETQAQRGRE CQCGLEASSV YSDHANANSL PFLMDLPSAG RSVLEASDQE EHLSQLDFLR 360
  361 SASFPLGTIN HRLNNRERSK LRTLRRQQRR ERWLQKQGKY SGVGLLDHMT VSNEMSTDEE 420
  421 TEFPEEKDSY MCAVCLDVYF NPYMCYPCHH IFCEPCLRTL AKDNPASTPC PLCRTIISRV 480
  481 FLQTELNNAT KTFFTKEYLK IKQSFQKSSS AKWPLPSCRK GFHLFGGFHR RAAPVTRRQF 540
  541 PHGAHRMDYL HFEDDSRGWW FDMDMVIIYI YSVNWVIGFV VFCFLCYFFF PF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle