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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45237197
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPRGSGSS TSLSTVGSEG DPAPGPTPAC SASRPEPLPG PPIRLHLSPV GIPGSARPSR  60
   61 LERVAREIVE TERAYVRDLR SIVEDYLGPL LDGGVLGLSV EQVGTLFANI EDIYEFSSEL 120
  121 LEDLENSSSA GGIAECFVQR SEDFDIYTLY CMNYPSSLAL LRELSLSPPA ALWLQERQAQ 180
  181 LRHSLPLQSF LLKPVQRILK YHLLLQELGK HWAEGPGTGG REMVEEAIVS MTAVAWYIND 240
  241 MKRKQEHAAR LQEVQRRLGG WTGPELSAFG ELVLEGAFRG GGGGGPRLRG GERLLFLFSR 300
  301 MLLVAKRRGL EYTYKGHIFC CNLSVSESPR DPLGFKVSDL TIPKHRHLLQ AKNQEEKRLW 360
  361 IHCLQRLFFE NHPASIPAKA KQVLLENSLH CAPKSKPVLE PLTPPLGSPR PRDARSFTPG 420
  421 RRNTAPSPGP SVIRRGRRQS EPVKDPYVMF PQNAKPGFKH AGSEGELYPP ESQPPVSGSA 480
  481 PPEDLEDAGP PTLDPSGTSI TEEILELLNQ RGLRDPGPST HDIPKFPGDS QVPGDSETLT 540
  541 FQALPSRDSS EEEEEEEEGL EMDERGPSPL HVLEGLESSI AAEMPSIPCL TKIPDVPNLP 600
  601 EIPSRCEIPE GSRLPSLSDI SDVFEMPCLP AIPSVPNTPS LSSTPTLSCD SWLQGPLQEP 660
  661 AEAPATRREL FSGSNPGKLG EPPSGGKAGP EEDEEGVSFT DFQPQDVTQH QGFPDELAFR 720
  721 SCSEIRSAWQ ALEQGQLARP GFPEPLLILE DSDLGGDSGS GKAGAPSSER TASRVRELAR 780
  781 LYSERIQQMQ RAETRASANA PRRRPRVLAQ PQPSPCLPQE QAEPGLLPAF GHVLVCELAF 840
  841 PLTCAQESVP LGPAVWVQAA IPLSKQGGSP DGQGLHVSNL PKQDLPGIHV SAATLLPEQG 900
  901 GSRHVQAPAA TPLPKQEGPL HLQVPALTTF SDQGHPEIQV PATTPLPEHK SHMVIPAPST 960
  961 AFCPEQGHCA DIHVPTTPAL PKEICSDFTV SVTTPVPKQE GHLDSESPTN IPLTKQGGSR1020
 1021 DVQGPDPVCS QPIQPLSWHG SSLDPQGPGD TLPPLPCHLP DLQIPGTSPL PAHGSHLDHR1080
 1081 IPANAPLSLS QELPDTQVPA TTPLPLPQVL TDIWVQALPT SPKQGSLPDI QGPAAAPPLP1140
 1141 EPSLTDTQVQ KLTPSLEQKS LIDAHVPAAT PLPERGGSLD IQGLSPTPVQ TTMVLSKPGG1200
 1201 SLASHVARLE SSDLTPPHSP PPSSRQLLGP NAAALSRYLA ASYISQSLAR RQGPGGGAPA1260
 1261 ASRGSWSSAP TSRASSPPPQ PQPPPPAARR LSYATTVNIH VGGGGRLRPA KAQVRLNHPA1320
 1321 LLASTQESMG LHRAQGAPDA PFHM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle