YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15431314
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSSSSCKLP SLSPVARSFS ACSVGLGRSS YRATSCLPAL CLPAGGFATS YSGGGGWFGE  60
   61 GILTGNEKET MQSLNDRLAG YLEKVRQLEQ ENASLESRIR EWCEQQVPYM CPDYQSYFRT 120
  121 IEELQKKTLC SKAENARLVV EIDNAKLAAD DFRTKYETEV SLRQLVESDI NGLRRILDDL 180
  181 TLCKSDLEAQ VESLKEELLC LKKNHEEEVN SLRCQLGDRL NVEVDAAPPV DLNRVLEEMR 240
  241 CQYETLVENN RRDAEDWLDT QSEELNQQVV SSSEQLQSCQ AEIIELRRTV NALEIELQAQ 300
  301 HSMRDALEST LAETEARYSS QLAQMQCMIT NVEAQLAEIR ADLERQNQEY QVLLDVRARL 360
  361 ECEINTYRGL LESEDSKLPC NPCAPDYSPS KSCLPCLPAA SCGPSAARTN CSPRPICVPC 420
  421 PGGRF

Type	Start	End	Confidence
Signal Peptide	1	48	0.73
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	425	0.99