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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5453662, gi|2...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGERRRRA VPAEGVRTAE RAARGGPGRR DGRGGGPRST AGGVALAVVV LSLALGMSGR  60
   61 WVLAWYRARR AVTLHSAPPV LPADSSSPAV APDLFWGTYR PHVYFGMKTR SPKPLLTGLM 120
  121 WAQQGTTPGT PKLRHTCEQG DGVGPYGWEF HDGLSFGRQH IQDGALRLTT EFVKRPGGQH 180
  181 GGDWSWRVTV EPQDSGTSAL PLVSLFFYVV TDGKEVLLPE VGAKGQLKFI SGHTSQLGNF 240
  241 RFTLLPPTSP GDTAPKYGSY NVFWTSNPGL PLLTEMVKSR LNSWFQHRPP GASPERYLGL 300
  301 PGSLKWEDRG PSGQGQGQFL IQQVTLKIPF SIEFVFESGS AQAGGNQALP RLAGSLLTQA 360
  361 LESHAEGFRE RFEKTFQLKE KGLSSGEQAL GQAALSGLLG GIGYFYGQGL VLPDIGVEGS 420
  421 EQKVDPALFP PVPLFTAVPS RSFFPRGFLW DEGFHQLVVQ RWDPSLTREA LGHWLGLLNA 480
  481 DGWIGREQIL GDEARARVPP EFLVQRAVHA NPPTLLLPVA HMLEVGDPDD LAFLRKALPR 540
  541 LHAWFSWLHQ SQAGPLPLSY RWRGRDPALP TLLNPKTLPS GLDDYPRASH PSVTERHLDL 600
  601 RCWVGLGARV LTRLAEHLGE AEVAAELGPL AASLEAAESL DELHWAPELG VFADFGNHTK 660
  661 AVQLKPRPPQ GLVRVVGRPQ PQLQYVDALG YVSLFPLLLR LLDPTSSRLG PLLDILADSR 720
  721 HLWSPFGLRS LAASSSFYGQ RNSEHDPPYW RGAVWLNVNY LALGALHHYG HLEGPHQARA 780
  781 AKLHGELRAN VVGNVWRQYQ ATGFLWEQYS DRDGRGMCRP FHGWTSLVLL AMAEDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle