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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18765696
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTAKEPSAS GKSVQQQEQE LVGSNPPQRN WKGIAIALLV ILVICSLIVT SVILLTPAED  60
   61 NSLSQKKKVT VEDLFSEDFK IHDPEAKWIS DTEFIYREQK GTVRLWNVET NTSTVLIEGK 120
  121 KIESLRAIRY EISPDREYAL FSYNVEPIYQ HSYTGYYVLS KIPHGDPQSL DPPEVSNAKL 180
  181 QYAGWGPKGQ QLIFIFENNI YYCAHVGKQA IRVVSTGKEG VIYNGLSDWL YEEEILKTHI 240
  241 AHWWSPDGTR LAYAAINDSR VPIMELPTYT GSIYPTVKPY HYPKAGSENP SISLHVIGLN 300
  301 GPTHDLEMMP PDDPRMREYY ITMVKWATST KVAVTWLNRA QNVSILTLCD ATTGVCTKKH 360
  361 EDESEAWLHR QNEEPVFSKD GRKFFFIRAI PQGGRGKFYH ITVSSSQPNS SNDNIQSITS 420
  421 GDWDVTKILA YDEKGNKIYF LSTEDLPRRR QLYSANTVGN FNRQCLSCDL VENCTYFSAS 480
  481 FSHSMDFFLL KCEGPGVPMV TVHNTTDKKK MFDLETNEHV KKAINDRQMP KVEYRDIEID 540
  541 DYNLPMQILK PATFTDTTHY PLLLVVDGTP GSQSVAEKFE VSWETVMVSS HGAVVVKCDG 600
  601 RGSGFQGTKL LHEVRRRLGL LEEKDQMEAV RTMLKEQYID RTRVAVFGKD YGGYLSTYIL 660
  661 PAKGENQGQT FTCGSALSPI TDFKLYASAF SERYLGLHGL DNRAYEMTKV AHRVSALEEQ 720
  721 QFLIIHPTAD EKIHFQHTAE LITQLIRGKA NYSLQIYPDE SHYFTSSSLK QHLYRSIINF 780
  781 FVECFRIQDK LPTVTAKEDE EED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle