YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GNGF_BACHD
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKNVVVFG GGTGLSVLLR GLKTFPVSIT AIVTVADDGG SSGRLRKELD IPPPGDVRNV  60
   61 LVALSEVEPL LEQLFQHRFE NGNGLSGHSL GNLLLAGMTS ITGDFARGIS EMSKVLNVRG 120
  121 KVLPASNRSI ILHGEMEDGT IVTGESSIPK AGKKIKRVFL TPKDTKPLRE GLEAIRKADV 180
  181 IVIGPGSLYT SVLPNLLVPG ICEAIKQSTA RKVYICNVMT QNGETDGYTA SDHLQAIMDH 240
  241 CGVGIVDDIL VHGEPISDTV KAKYAKEKAE PVIVDEHKLK ALGVGTISDY FVLEQDDVLR 300
  301 HNASKVSEAI LEGKPRTSSS IQ

Type	Start	End	Confidence
Signal Peptide	1	21	0.61
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	322	0.96