YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YQIH_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYLNTKNII AAGVLLSCMS SIAWGAIIPD RTRIIMNESD KGEALKLTNQ SKNLPYLAQT  60
   61 WIEDTKGNKS RDFIVTVPPM VRLNPSEQIQ IRMITQEKIA QLPKDRETLF YFNVREIPPK 120
  121 TDKKNVMQVT MQHALKLFWR PKAIELEDDG VMTYEKVEII RRNDGSIRFN NKMPYHVTLG 180
  181 YIGTNGVTML PQTQSLMVTP FSYANTQFKN VPSTFQVGYI NDFGGLSFYE INCPVVNNIC 240
  241 NISVANRDQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	249	0.99