YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YPHA_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLRYFDFG AARPVLLLIA RIAVVLIFII FGFPKMMGFD GTVQYMASLG APMPMLAAII  60
   61 AVVMEVPAAI LIVLGFFTRP LAVLFIFYTL GTAVIGHHYW DMTGDAVGPN MINFWKNVSI 120
  121 AGAFLLLAIT GPGAISLDRR

Type	Start	End	Confidence
Cytoplasmic	1	13	0.89
Transmembrane Helix	14	34	0.90
Non-Cytoplasmic	35	52	0.79
Transmembrane Helix	53	74	0.87
Cytoplasmic	75	80	0.66
Transmembrane Helix	81	100	0.91
Non-Cytoplasmic	101	117	0.86
Transmembrane Helix	118	137	0.93
Cytoplasmic	138	140	0.90