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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: yl-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCQAEHQVHP SEQRIRVESP KMTASRRGFN LTSQTRAHPS SGGSTSSRYG NCQRTHLIIN  60
   61 GRHVAISLLL LVGLCGGTAA GTPGSADTRC DAGQFQCRDG GCILQAKMCD GRGDCKDSSD 120
  121 ELDCDYRLCR PPHWFPCAQP HGACLAAELM CNGIDNCPGG EDELNCPVRP GFRFGDTAHR 180
  181 MRSCSKYEFM CQQDRTCIPI DFMCDGRPDC TDKSDEVAGC KQAEITCPGE GHLCANGRCL 240
  241 RRKQWVCDGV DDCGDGSDER GCLNLCEPQK GKFLCRNRET CLTLSEVCDG HSDCSDGSDE 300
  301 TDLCHSKPDC DAKKCALGAK CHMMPASGAE CFCPKGFRLA KFEDKCEDVD ECKEQDDLCS 360
  361 QGCENTSGGY RCVCDAGYLL DKDNRTCRAV VYGSKEQQPL LLYTTQMTIM GMHLREDNVR 420
  421 NHVYQVAGNL SKVIGVAYDG SHIYWTNIQN EAESIVKANG DGSNAEILLT SGLDAPEDLA 480
  481 VDWLTQNIYF SDNIMRHIAV CSNDGLNCAV LVTQDVHQPR SLAVWPQKGL MFWTDWGEKP 540
  541 MIGRASMDGS RSRPIVSDNI EWPNGIALDM HQQRIYWVDA KLGSVQTVRP DGTGRRTVLD 600
  601 GMLKHPYGLA IFEDQLYWSD WATKSVHACH KFSGKDHRIL AKDRTIYAVH IYHPAKQPNS 660
  661 PHGCENATCS HLCLLAEPEI GGHSCACPDG MRLAPDHRRC MLMEKRQRLF IGLGQVLLEI 720
  721 EHTAFGRHQV SKSYTLPCLI NEMVYNRING SLIIADNDQR LILEFQPESH ESNVLVRSNL 780
  781 GNVSALAFDH LSRNLYWADT ERAVIEVLSL QTRHRALIRF FPGQEVPIGL TVMPAEGYLY 840
  841 VVLKAKRHSH IDKIPLSGKG EQVHVFEDDL GDDDIKLVTD YETQTIFWSD SDLGRISYSN 900
  901 YRVPHSQIFR GKLRRPYSLA MVHHDLFWNE LGTPRIYWTH KSNMGPRKVI DIMEKDDPAA 960
  961 IMPYVPVATP NGIPLAASSP VGQESHPCQQ QNGGCSHICV GEGPYHSICL CPAGFVYRDA1020
 1021 GNRTCVEALD CEFRCHSGEC LTMNHRCNGR RDCVDNSDEM NCDEEHRRKP KVLCSPNQFA1080
 1081 CHSGEQCVDK ERRCDNRKDC HDHSDEQHCE KFDKSKKCHV HQHGCDNGKC VDSSLVCDGT1140
 1141 NDCGDNSDEL LCEATSRCEP GMFQCGSGSC IAGSWECDGR IDCSDGSDEH DKCVHRSCPP1200
 1201 DMQRCLLGQC LDRSLVCDGH NDCGDKSDEL NCGTDSSTMN ISCAEDQYQC TSNLKICLPS1260
 1261 TVRCNGTTEC PRGEDEADCG DVCSIYEFKC RSGRECIRRE FRCDGQKDCG DGSDELSCEL1320
 1321 EKGHHNQSQI QPWSTSSRSC RPHLFDCQDG ECVDLSRVCN NFPDCTNGHD EGPKCATACR1380
 1381 SASGRQVCQH KCRATPAGAV CSCFDGYRLD ADQKSCLDID ECQEQQPCAQ LCENTLGGYQ1440
 1441 CQCHADFMLR QDRVSCKSLQ SGATLLFSSF NEVRNLSEQP VMLNVAWSAN DSRITGFDLA1500
 1501 MHRQMGYFSA EDEGIVYQID LQTKVIVRAL GLPAPTKLSV DWVTGNVYVL SGAQEIQACS1560
 1561 FVGRMCGRIV HVKSPRHVKH LAVDGYHARI FYIVIRTEGY GQTSSEIHMA RLDGSRRDML1620
 1621 LQRSESFMTA LTTDPHQQLL YFVDQHMRTL ERISYRLKTG PMRRPEIMLQ KSNALMHPSG1680
 1681 LSVYENNAFI VNLGSVEAVQ CALYGSRICH KISINVLNAQ DIVVAGRSRQ PQKASHPCAH1740
 1741 AHCHGLCLQA DYGYECMCGN RLVAEGERCP HGSGNEVAVL GAVNSLELEH EHEQNGHFHW1800
 1801 LMALFVLAAG SLIAGLGYMY YQYRQRGHTD LNINMHFQNP LATLGGTKAF LEHERAEAGV1860
 1861 GFTTETGTVS SRGSNDTFTT TSATSSFAAQ QFSVPNALQR LLRPRQSASG DPMAQELLLE1920
 1921 SPSRESKLHA LDGGGAGGDG DGGRGVGRQV PDILVADMDD DAAKSAGQFG GNYAGNDANA1980
 1981 RFVS

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