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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YJIT_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWGFVFVSF ISKELALGQS EYISWVKCTS WLSNFVNLRG LRQPDGRPLY EYHATNDEYT  60
   61 QLTQLLRAVG QSQSNICNRD FAACFVLFCS EWYRRDYERQ CGWTWDPIYK KIGISFTATE 120
  121 LGTIVPKGME DYWLRPIRFY ESERRNFLGT LFSEGGLPFR LLKESDSRFL AVFSRILGQY 180
  181 EQAKQSGFSA LSLARAVIEK SALPTVFSED TSVELISHMA DNLNSLVLTH NLINHKEPVQ 240
  241 QLEKVHPTWR SEFPIPLDDE TGTHFLNGLL CAASVEAKPR LQKNKSTRCQ FYWSEKHPDE 300
  301 LRVIVSLPDE VSFPVTSEPS TTRFELAICE DGEEVSGLGP AYASLENRQA TVRLRKSEVR 360
  361 FGRQNPSAGL SLVARAGGMI VGSIKLDDSE IAIGEVPLTF IVDADQWLLQ GQASCSVRSS 420
  421 DVLIVLPRDN SNVAGFDGQS RAVNVLGLKA LPVKGCQDVT VTANETYRIR TGREQISIGR 480
  481 FALNGKRASW VCHPDETFIG VPKVISTLPD IQSIDVTRYT C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle