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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YJGX_ECOLI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRPVFPVYH FLVSAAILVF VVIFWRTHHR DHRNWLALRL FVLCSVNRWP LRMVKGTVVG  60
   61 TTDTLREMQR YEQLSSTGLT TGKSSRXAPL YDTIVIVTGE SVRRDYMSVY DYPVPTTPWL 120
  121 NTAPGLFIDD YTSTASSTVS SLSRTLIYDY EQNPDSGNNV VALAAKAGYS TWWISNQGKL 180
  181 GEHDTRISVI ASDAEHATFL KKGSFASRKT DDKLLLQETE RALADTSSPK IIFLHMMGSH 240
  241 PNPCDSLNSX PNNYLEQYPR KIACYLASIS KLDNFLGQLD GILRRYSRHF AMLYFSGLGL 300
  301 SVSDSANPVH HYGHVQGGYS VPLIITASDI TSHQPVSRKI SARHFAGIFQ WMTGICTENI 360
  361 PPFNPLTDED N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle