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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y1919_SYNY3
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNPKPLPPQ SELDNIRRYN AQAIANYYRR RPWKVLWRAL EVVWSFGFFL TCLLWDQWTG  60
   61 QVEYYKRQRA EDLRELLTKL GPTFIKVGQA LSTRPDLVRR DFLEELIKLQ DQLPPFDNDL 120
  121 AFQLMEEQLG MKVDEAYREI SAHPVAAASL GQVYRAMLFS GEEVAVKVQR PNLRPRLSLD 180
  181 LYLMRLGAQK FGRFLPLNLG HDLTLIVDEF GIKLFEEIDY LNEGRNAEKF AENFHGDAEV 240
  241 KVPCIYWQYS NQKVLTLEWI QGFKLTDTDK IRAAGLDPSD IIRIGVTSGL RQLLEHGFFH 300
  301 ADPHPGNLFA TLDGRMAYID FGMMDQLEPG TKETIASSIV QLINKDYLAL TEDFIALGFL 360
  361 APNTDITPII PALENVFGSA IGQSVQDFNF KTITDDFSEL MYDYPFRVPA KFALIIRSLV 420
  421 TQEGLALSLD PNFKIVEVAY PYVARRLLTG ESPQLRRQLI DVLFKNGKFQ WQRLENMLSI 480
  481 ARSDTKFDLL PTAQLGLQFL FSEEGLYLRR QILLALTEDD RLHTDEVQRI WGLVKDDFKP 540
  541 QELVNVAWNA VREFSLAGVS TILPQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle