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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YICH_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFIGKLLLY ILIALLVAIA GLYFLLQTRW GAEHISAWVS ENSDYHLAFG AMDHRFSAPS  60
   61 HIVLENVTFG RDGQPATLVA KSVDIALSSR QLTEPRHVDT ILLENGTLNL TDQTAPLPFK 120
  121 ADRLQLRDMA FNSPNSEWKL SAQRVNGGVV PWSPKAGKVL GTKAQIQFSA GSLSLNDVPA 180
  181 TNVLIEGSID NDRVTLTNLG ADIARGTLTG NAQRNADGSW QVENLRMADI RLQSEKSLTD 240
  241 FFAPLRSVPS LQIGRLEVID ARLQGPDWAV TDLDLSLRNM TFSKDDWQTQ EGKLSMNASE 300
  301 FIYGSLHLFD PIINTEFSPQ GVALRQFTSR WEGGMVRTSG NWLRDGKTLI LDDAAIAGLE 360
  361 YTLPKNWQQL WMETTPGWLN SLQLKRFSAS RNLIIDIDPD FPWQLTALDG YGANLTLVTD 420
  421 HKWGVWSGSA NLNAAAATFN RVDVRRPSLA LTANSSTVNI SELSAFTEKG ILEATASVSQ 480
  481 TPQRQTHISL NGRGVPVNIL QQWGWPELPL TGDGNIQLTA SGDIQANVPL KPTVSGQLHA 540
  541 VNAAKQQVTQ TMNAGIVSSG EVTSTEPVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle