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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YIAV_ECOLI
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLIILTYV AFAWAMFKIF KIPVNKWTIP TAALGGIFIV SGLILLMNYN HPYTFKAQKA  60
   61 VISIPVVPQV TGVVIEVTDK KNTLIKKGEV LFRLDPTRYQ ARVDRLMADI VTAEHKQRAL 120
  121 GAELDEMAAN TQQAKATRDK FAKEYQRYAR GSQAKVNPFS ERDIDVARQN YLAQEASVKS 180
  181 SAAEQKQIQS QLDSLVLGEH SQIASLKAQL AEAKYNLEQT IVRAPSDGYV TQVLIRPGTY 240
  241 AASLPLRPVM VFIPDQKRQI VAQFRQNSLL RLAPGDDAEV VFNALPGKVF SGKLAAISPA 300
  301 VPGGAYQSTG TLQTLNTAPG SDGVIATIEL DEHTDLSALP DGIYAQVAVY SDHFSHVSVM 360
  361 RKVLLRMTSW VHYLYLDH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle