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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YHJJ_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGTKIRLLA GGLLMMATAG YVQADALQPD PAWQQGTLSN GLQWQVLTTP QRPSDRVEIR  60
   61 LLVNTGSLAE STQQSGYSHA IPRIALTQSG GLDAAQARSL WQQGIDPKRP MPPVIVSYDT 120
  121 TLFNLSLPNN RNDLLKEALS YLANATGKLT ITPETINHAL QSQDMVATWP ADTKEGWWRY 180
  181 RLKGSTLLGH DPADPLKQPV EAEKIKDFYQ KWYTPDAMTL LVVGNVDARS VVDQINKTFG 240
  241 ELKGKRETPA PVPTLSPLRA EAVSIMTDAV RQDRLSIMWD TPWQPIRESA ALLRYWRADL 300
  301 AREALFWHVQ QALSASNSKD IGLGFDCRVL YLRAQCAINI ESPNDKLNSN LNLVARELAK 360
  361 VRDKGLPEEE FNALVAQKKL ELQKLFAAYA RADTDILMGQ RMRSLQNQVV DIAPEQYQKL 420
  421 RQDFLNSLTV EMLNQDLRQQ LSNDMALILL QPKGEPEFNM KALQAVWDQI MAPSTAAATT 480
  481 SVATDDVHPE VTDIPPAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle