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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YHJG_ECOLI
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKRTMSKAG KITAAISGAF LLLIVVAIIL IATFDWNRLK PTINQKVSAE LNRPFAIRGD  60
   61 LGVVWERQKQ ETGWRSWVPW PHVHAEDIIL GNPPDIPEVT MVHLPRVEAT LAPLALLTKT 120
  121 VWLPWIKLEK PDARLIRLSE KNNNWTFNLA NDDNKDANAK PSAWSFRLDN ILFDQGRIAI 180
  181 DDKVSKADLE IFVDPLGKPL PFSEVTGSKG KADKEKVGDY VFGLKAQGRY NGEPLTGTGK 240
  241 IGGMLALRGE GTPFPVQADF RSGNTRVAFD GVVNDPMKMG GVDLRLKFSG DSLGDLYELT 300
  301 GVLLPDTPPF ETDGRLVAKI DTEKSSVFDY RGFNGRIGDS DIHGSLVYTT GKPRPKLEGD 360
  361 VESRQLRLAD LGPLIGVDSG KGAEKSKRSE QKKGEKSVQP AGKVLPYDRF ETDKWDVMDA 420
  421 DVRFKGRRIE HGSSLPISDL STHIILKNAD LRLQPLKFGM AGGSIAANIH LEGDKKPMQG 480
  481 RADIQARRLK LKELMPDVEL MQKTLGEMNG DAELRGSGNS VAALLGNSNG NLKLLMNDGL 540
  541 VSRNLMEIVG LNVGNYIVGA IFGDDEVRVN CAAANLNIAN GVARPQIFAF DTENALINVT 600
  601 GTASFASEQL DLTIDPESKG IRIITLRSPL YVRGTFKNPQ AGVKAGPLIA RGAVAAALAT 660
  661 LVTPAAALLA LISPSEGEAN QCRTILSQMK K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle