YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YHFX_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVEALKRQN PALISAALSL WQQGKIAPDS WVIDVDQILE NGKRLIETAR LYGIELYLMT  60
   61 KQFGRNPWLA EKLLALGYSG IVAVDYKEAR VMRRAGLPVA HQGHLVQIPC HQVADAVEQG 120
  121 TDVITVFTLD KAREVSAAAV KAGRIQSVLL KVYSDDDFLY PGQESGFALK VLPEIVAEIQ 180
  181 NLPGLHLAGL THFPCLLWDE AVGKVLPTPN LHTLIQARDQ LAKSGIALEQ LNAPSATSCT 240
  241 SLPLLAQYGV THAEPGHALT GTIPANQQGD QPERIAMLWL SEISHHFRGD SYCYGGGYYR 300
  301 RGHAQHALVF TPENQKITET NLKTVDDSSI DYTLPLAGEF PVSSAVVLCF RTQIFVTRSD 360
  361 VVLVSGIHRG EPEIVGRYDS LGNSLGA

Type	Start	End	Confidence
Signal Peptide	1	24	0.56
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	387	0.99