YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YHCF_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNVKLLIAG SAFFAMSAQA ADRVSIDVKV TLEAAACTPI LSNGGVVNFG SHSVNRLSTQ  60
   61 HYTQIGTRNI NMTITCESAT GIAITARDTR MDSMTTGKDS GGQSGVKYTL NGGGYISQTT 120
  121 RLFGLGKTKD NKNIGSYAVL IDSNNISASN GSQTLAVSIA GADAVITGQK RAWQTLTAYP 180
  181 LAVDQSYYYT FVKPGETTPT PVTNAIIPLQ VSASIANDLG GSEKIELDGK AVISVVYL

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	238	0.99