YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YHCA_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRHITFTVF ITTSMNTLAT GMVPETSVLL VDEKRGEASI NIKNTDDHPS LLYTTIVDLP  60
   61 ESNKSIRLIP TQPVIRVEAG QVQQVRFLLQ ATVPLQSEEL KRVTFEGIPP KDDKSSRVTV 120
  121 SIRQDLPVLI HPASLPEERE TWKFLEWRKN GDQIEISNPS NYVVRMTLQF KTLPSGKTGA 180
  181 INKTYFLPHT STTTALTNAT DTKVEFYPAS RYGYRGNKYV TDLK

Type	Start	End	Confidence
Signal Peptide	1	19	0.82
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	224	0.99