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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7450863
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALSTKLEP TNSYSESLPP QRRSPLEAEG RYRWNRGNYS ITRRRIDIWG FVLTLLYQFW  60
   61 LNGKKWSYAG GYTEEKLQQR RRRQAKWIRE NLLSLGPTFI KVGQLFSTRS DLFPAEYVEE 120
  121 LSKLQDEVPA FSYEQAAGII EEELGKPIAK LYRSFDPVPL AAASLGQVHK AQLHTGEDVV 180
  181 VKVQRPGLKK LFTIDLAILK KIAQYFQNHP KWGRGRDWNG IYEECCKILW QETDYLREGR 240
  241 SADTFRRNFR GEDWVKVPRV YWRYTSTQIL TLEYLPGIKI SHYDALEAAG LERKELAQLG 300
  301 ARAYLFQLLN HGFFHADPHP GNLAVSPEAG ELIFYDFGMM GEITPDTKNK LMDTLFGVAE 360
  361 KNAERIVNSL VALGALKETE DMGPIRRSVQ FLLDNFMDKP FEEQSITKIS DDLYEIAYDQ 420
  421 PFRFPATFTF VMRAFSTLEG VGKGLDPDFN FMAVAQPFAL QIMNNSNGFN PAGNIMDELG 480
  481 RQAVQVGNSA LGLPRRIEDS LDRLDRGDIR VRVRSTETDR LLRRMGTMQM GTNYVLFTCA 540
  541 LVLSATLLFV NNYFMAAAVV LLMSLVPAFA LWRLLKRLER QDRMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle