YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YGGT_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLTFLLST VIELYTMVLL LRIWMQWAHC DFYNPFSQFV VKVTQPIIGP LRRVIPAMGP  60
   61 IDSASLLVAY ILSFIKAIVL FKVVTFLPII WIAGLLILLK TIGLLIFWVL LVMAIMSWVS 120
  121 QGRSPIEYVL IQLADPLLRP IRRLLPAMGG IDFSPMILVL LLYVINMGVA EVLQATGNML 180
  181 LPGLWMAL

Type	Start	End	Confidence
Cytoplasmic	1	6	0.70
Transmembrane Helix	7	26	0.73
Non-Cytoplasmic	27	60	0.52
Transmembrane Helix	61	86	0.72
Cytoplasmic	87	88	0.29
Transmembrane Helix	89	119	0.76
Non-Cytoplasmic	120	148	0.44
Transmembrane Helix	149	177	0.72
Cytoplasmic	178	188	0.39