YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YFBJ_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLMWGLFSV IIASVAQLSL GFAASHLPPM THLWDFIAAL LAFGLDARIL LLGLLGYLLS  60
   61 VFCWYKTLHK LALSKAYALL SMSYVLVWIA SMVLPGWEGT FSLKALLGVA CIMSGLMLIF 120
  121 LPTTKQRY

Type	Start	End	Confidence
Cytoplasmic	1	6	0.83
Transmembrane Helix	7	27	0.93
Non-Cytoplasmic	28	43	0.74
Transmembrane Helix	44	65	0.85
Cytoplasmic	66	75	0.76
Transmembrane Helix	76	94	0.94
Non-Cytoplasmic	95	101	0.75
Transmembrane Helix	102	123	0.91
Cytoplasmic	124	128	0.91