YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YEHW_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMLRDPLFW LIALFVALIF WLPYSQPLFA ALFPQLPRPV YQQESFAALA LAHFWLVGIS  60
   61 SLFAVIIGTG AGIAVTRPWG AEFRPLVETI AAVGQTFPPV AVLAIAVPVI GFGLQPAIIA 120
  121 LILYGVLPVL QATLAGLGAI DASVTEVAKG MGMSRGQRVR KVELPLAAPV ILAGVRTSVI 180
  181 INIGTATIAS TVGASTLGTP IIIGLSGFNT AYVIQGALLV ALAAIIADRL FERLVQALSQ 240
  241 HAK

Type	Start	End	Confidence
Cytoplasmic	1	7	0.93
Transmembrane Helix	8	28	0.90
Non-Cytoplasmic	29	50	0.89
Transmembrane Helix	51	75	0.89
Cytoplasmic	76	90	0.83
Transmembrane Helix	91	112	0.85
Non-Cytoplasmic	113	119	0.58
Transmembrane Helix	120	145	0.81
Cytoplasmic	146	165	0.87
Transmembrane Helix	166	189	0.73
Non-Cytoplasmic	190	210	0.55
Transmembrane Helix	211	231	0.85
Cytoplasmic	232	243	0.97