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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YEDQ_ECOLI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQHETKMENQ SWLKKLARRL GPGHVVNLCF IVVLLFSTLL TWREVVVLED AYISSQRNHL  60
   61 ENVANALDKH LQYNVDKLIF LRNGMREALV APLDFTSLRD AVTEFEQHRD EHAWKIELNR 120
  121 RRTLPVNGVS DALVSEGNLL SRENESLDNE ITAALEVGYL LRLAHNSSSM VEQAMYVSRA 180
  181 GFYVSTQPTL FTRNVPTRYY GYVTQPWFIG HSQRENRHRA VRWFTSQPEH ASNTEPQVTV 240
  241 SVPVDSNNYW YGVLGMSIPV RTMQQFLRNA IDKNLDGEYQ LYDSKLRFLT SSNPDHPTGN 300
  301 IFDPRELALL AQAMEHDTRG GIRMDSRYVS WERLDHFDGV LVRVHTLSEG VRGDFGSISI 360
  361 ALTLLWALFT TMLLISWYVI RRMVSNMYVL QSSLQWQAWH DTLTRLYNRG ALFEKARPLA 420
  421 KLCQTHQHPF SVIQVDLDHF KAINDRFGHQ AGDRVLSHAA GLISSSLRAQ DVAGRVGGEE 480
  481 FCVILPGASL TEAAEVAERI RLKLNEKEML IAKSTTIRIS ASLGVSSSEE TGDYDFEQLQ 540
  541 SLADRRLYLA KQAGRNRVFA SDNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle