YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YCBR_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTCITKGIV TVSLTAILLS CSSAWAAGKG GIGLAATRLV YSEGEEQISL GVRNTSPDVP  60
   61 YLIQSWVMTP DNKKSADFII TPPLFVLNPA NENLLRIMYI GAPLAKDRET LFFTSVRAVP 120
  121 STTKRKEGNT LKIATQSVIK LFWRPKGLAY PLGEAPAKLR CTSSADMVTV SNPTPYFITL 180
  181 TDLKIGGKVV KNQMISPFDK YQFSLPKGAK NSSVTYRTIN DYGAETPQLN CKS

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	233	0.99