YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YBJC_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAIGKLPKG VLILEFIGMM LLAVALLSVS DSLSLPEPFS RPEVQILMIF LGVLLMLPAA  60
   61 VVVILQVAKR LAPQLMNRPP QYSRSEREKD NDANH

Type	Start	End	Confidence
Cytoplasmic	1	10	0.90
Transmembrane Helix	11	30	0.94
Non-Cytoplasmic	31	45	0.87
Transmembrane Helix	46	68	0.94
Cytoplasmic	69	95	0.99