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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YBGQ_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIYRLSFVS CLVMAMPCAM AVEFNLNVLD KSMRDRIDIS LLKEKGVIAP GEYFVSVAVN  60
   61 NNKISNGQKI NWQKKGDKTI PCINDSLVDK FGLKPDIRQS LPQIDRCIDF SSRPEMLFNF 120
  121 DQANQQLNIS IPQAWLAWHS ENWAPPSTWK EGVAGVLMDY NLFASSYRPQ DGSSSTNLNA 180
  181 YGTAGINAGA WRLRSDYQLN KTDSEDNHDQ SGGISRTYLF RPLPQLGSKL TLGETDFSSN 240
  241 IFDGFSYTGA ALASDDRMLP WELRGYAPQI SGIAQTNATV TISQSGRVIY QKKVPPGPFI 300
  301 IDDLNQSVQG TLDVKVTEED GRVNNFQVSA ASTPFLTRQG QVRYKLAAGQ PRPSMSHQTE 360
  361 NETFFSNEVS WGMLSNTSLY GGLLISDDDY HSAAMGIGQN MLWLGALSFD VTWASSHFDT 420
  421 QQDERGLSYR FNYSKQVDAT NSTISLAAYR FSDRHFHSYA NYLDHKYNDS DAQDEKQTIS 480
  481 LSVGQPITPL NLNLYANLLH QTWWNADAST TANITAGFNV DIGDWRDISI STSFNTTHYE 540
  541 DKDRDNQIYL SISLPFGNGG RVGYDMQNSS HSTIHRMSWN DTLDERNSWG MSAGLQSDRP 600
  601 DNGAQVSGNY QHLSSAGEWD ISGTYAASDY SSVSSSWSGS FTATQYGAAF HRRSSTNEPR 660
  661 LMVSTDGVAD IPVQGNLDYT NHFGIAVVPL ISSYQPSTVA VNMNDLPDGV TVAENVIKET 720
  721 WIEGAIGYKS LASRSGKDVN VIIRNASGQF PPLGADIRQD DSGISVGMVG EEGHAWLSGV 780
  781 AENQLFTVVW GEQSCIIHLP ERLEDTTKRL ILPCH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle