YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YAFK_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIALILAM LLIPCVSFAG LLGSSSSTTP VSKEYKQQLM GSPVYIQIFK EERTLDLYVK  60
   61 MGEQYQLLDS YKICKYSGGL GPKQRQGDFK SPEGFYSVQR NQLKPDSRYY KAINIGFPNA 120
  121 YDRAHGYEGK YLMIHGDCVS IGCYAMTNQG IDEIFQFVTG ALVFGQPSVQ VSIYPFRMTD 180
  181 ANMKRHKYSN FKDFWEQLKP GYDYFEQTRK PPTVSVVNGR YVVSKPLSHE VVQPQLASNY 240
  241 TLPEAK

Type	Start	End	Confidence
Signal Peptide	1	27	0.88
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	246	0.99