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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7469256
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAPMPVTT AEQDRDVVVI DAVVEEVRPP RLPKSHLEDL GPVSDMFPES WEYHPDLIME  60
   61 FYRKRPLQVL GRLINILFPL LRFILGIWWE KLRGKDPTVS RAKAIQLREL LTNLGPTYIK 120
  121 VGQALSTRPD LVPPVFLDEL TTLQDQLPSF PNEVAYRFIE EELGAPAEEI YAELSPEPIA 180
  181 AASLGQVYKG KLKTGEAVAV KVQRPDLVRR ITLDIYIMRS LSLWARRSVK RLRSDLVAIT 240
  241 DELASRVFEE MNYYQEAING EKFAQLYGSL PEIYVPSIYW QYTGRRVLTM EWVEGIKLTN 300
  301 IKAIQAQGID ATHLVEVGVQ CSLRQLLEHG FFHADPHPGN LLAMADGRLA YLDFGMMSTI 360
  361 QPYQRYGLIE AVVHLVNRDF DSLAKDYVKL DFLKPDTDLK PIIPALGQVF GNALGASVAE 420
  421 LNFKSITDQM SAMMYEFPFR VPAYYALIIR SMVTLEGIAI GIDPNFKVLS KAYPYIAKRL 480
  481 LTDQSEELRT SLKELLFKEG SFRWNRLENL LRNAKNSPGF DFDYVLNEAT EFLLSDRGQF 540
  541 IRDRLVAELV NSIDQLGRNT WQQVSHNIQE RISFLGDLGN GNGKAHQTKT IKVVPQPAIA 600
  601 QQEETWQHLQ NLWQILKETP GFDPLKFVPV LSQIIVNPTS RRMGQQVAEG LLQKAIARVI 660
  661 RQWALALESQ PNPAIKIRNA A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle