YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UBIH_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVIIVGGGM AGATLALAIS RLSHGALPVH LIEATAPESH AHPGFDGRAI ALAAGTCQQL  60
   61 ARIGVWQSLA DCATAITTVH VSDRGHAGFV TLAAEDYQLA ALGQVVELHN VGQRLFALLR 120
  121 KAPGVTLHCP DRVANVARTQ SHVEVTLESG ETLTGRVLVA ADGTHSALAT ACGVDWQQEP 180
  181 YEQLAVIANV ATSVAHEGRA FERFTQHGPL AMLPMSDGRC SLVWCHPLER REEVLSWSDE 240
  241 KFCRELQSAF GWRLGKITHA GKRSAYPLAL THAARSITHR TVLVGNAAQT LHPIAGQGFN 300
  301 LGMRDVMSLA ETLTQAQERG EDMGDYGVLC RYQQRRQSDR EATIGVTDSL VHLFANRWAP 360
  361 LVVGRNIGLM TMELFTPARD VLAQRTLGWV AR

Type	Start	End	Confidence
Signal Peptide	1	25	0.95
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	392	0.99