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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TSP4B_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGTMHLLTA VSLILMLSSA NAESTVYNLL TSPDCLPDLL HGGLAEQGVT ELYILTTFRI  60
   61 QPGTGNTIFS LYNPRDNSKY FEFSVFGKAN KAILRYLRRD GRMSAVTFNK LNLADGEKHR 120
  121 LLFHLKGLEV GHPGGFPHSQ GALPVPGVEL HLDCRLVETL RDLPAVFNGL NNHQAVELKT 180
  181 MQGKAQEGLE ELKLAYGDSV ENVASLQDCH TQSDSVQALG LNTKQLTTQM LELTKVINEL 240
  241 KDVLIQQVKE TSFLRNTISE CQACGLSGAE VVKPKCAPGV CFRDDMCIET AEGVECGPCP 300
  301 DGYTGDGYSC DDVDECQFNP CFPGVRCVNM APGFRCEACP LGFTGKPLEG VGVAYAQTHK 360
  361 QVCDDIDECK GPDNGGCTAN SICVNSVGSY QCGRCKTGFT GDQIRGCKPE KSCGNRLQNP 420
  421 CDPNAQCTEE RDGTITCQCG IGWAGNGYLC GKDTDIDGYP DERLRCRDPT CRKDNCVTVP 480
  481 NSGQEDADGD GKGDACDPDA DGDGILNEQD NCWLTPNINQ QNSDKDSHGD ACDNCVRVDN 540
  541 PDQRDTDSDG LGDACDDDMD GDGLKNFLDN CQRVKNRDQL DRDGDGVGDA CDSCPDIPNP 600
  601 NQSDIDNDLV GDSCDTNQDS DGDGHQDSKD NCPMVINSSQ LDTDKDGIGD ECDDDDDNDG 660
  661 IPDSLPPGPD NCRLVPNPEQ IDDNNDGVGD ICESDFDQDK VIDRIDNCPE NAEITLTDFR 720
  721 AYQTVVLDPE GDAQIDPNWV VLNQGMEIVQ TMNSDPGLAV GYTAFSGVDF EGTFHVNTVT 780
  781 DDDYAGFIFG YQDSSSFYVV MWKQTEQTYW QATPFRAVAE PGIQLKAVKS KTGPGEHLRN 840
  841 SLWHTGDTND QVRLLWKDPR NVGWKDKVSY RWYLQHRPQV GYIRVRFYEG TELVADSGVT 900
  901 IDTTMRGGRL GVFCFSQENI IWSNLKYRCN DTIPEDFQEF STQHGMDPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle