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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TREA_EMENI
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFKSVFTLL PLLAQLPSGG ASLPNNHGRV ENCVRNHDGI HKFRHSNNTY QSMFPGVTWD  60
   61 EDQWVLTTSS LDQGHYQSRG SVANGYIGIS VSSVGPFFEL DLPVAGDVIN GWPLYSRRQS 120
  121 FATISGFFDI QAETNGSNFP WMNQYGGESV ISGVPHWSGL ILDLGDDDYL DSTVDNVTLS 180
  181 DFKSSYDFKA GVLSWSYTWT PAGDKGSYAI TYRLFANKLN VNQAVVDMEI TPSQDGHATI 240
  241 VNVLDGYSAV RTDFVESQED DGAIYSAVRP WGIPDVSAYF YANITGSKHV DLSSRRLIHG 300
  301 KPYVSANESS IAQAADVNFV ANEKVRITKF VGAASTDAFP DPQATAKRAV SEALDAGYQR 360
  361 SLRSHVQEWA SIMHEDSVDR YVNPTTGKLP DDDNIINSAI IAVANTYYLL QNTVGKNAIR 420
  421 AAQDAPLNVN SFSVGGLVSD SYAGLVFWDA DVWMQPGLVA SHPEAAQAVT NYRTKLYPQA 480
  481 KKNIETTYTG SKNATYIDPS AAIYPWTSGR FGNCTGTGAC WDYQYHLNGD IGLSLIYQWV 540
  541 VSGDTNTFRE KHFPIYDSVA ALYGSIVERN GSYWTLTNMT DPDEYANHID AGGFTMPMIS 600
  601 ETLEYANQFR QQFGLEPNET WTEISENVLV LRENGVTLEY TTMNGTAAVK QADIVLVTYP 660
  661 LVYDNYTAET ALTDLDYYAN RQSADGPAMT WAIFSIAAGA VSPSGCSAYT YHQYSYAPYA 720
  721 RAPFFQLSEQ MLDNASINGG THPAYPFLTG HGGANQVVLF GYLGLRLLPD DAIHIEPNLP 780
  781 PQIPYVKYRT FYWRGWPISA QSNYTHTVLQ RSQSAPLDTA DRRFANTSIP VFVGLADNAT 840
  841 LHHLPPHGPL TVRNREIGTI NTIEDNLIQC SPVSSTDAFE QGQFPISVVD GATSTRWQPS 900
  901 SSNASAVTVN LGSTTGRSVQ TVASGFHFDW AAAPPVNASV IFHDTPLSDP VAALSSPGPH 960
  961 VRIVANLTNI EQSGPYDPEA TDLNEIKIPV GNTTRIELAQ EVPVGRYATL VISGNQALAQ1020
 1021 ADGEDHVGAT VAEWAILGPK SGSPRRRIQP VPLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle