YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TOLQ_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDMNILDLF LKASLLVKLI MLILIGFSIA SWAIIIQRTR ILNAAAREAE AFEDKFWSGI  60
   61 ELSRLYQESQ GKRDNLTGSE QIFYSGFKEF VRLHRANSHA PEAVVEGASR AMRISMNREL 120
  121 ENLETHIPFL GTVGSISPYI GLFGTVWGIM HAFIALGAVK QATLQMVAPG IAEALIATAI 180
  181 GLFAAIPAVM AYNRLNQRVN KLELNYDNFM EEFTAILHRQ AFTVSESNKG

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.81
Transmembrane Helix	15	36	0.93
Cytoplasmic	37	128	0.85
Transmembrane Helix	129	155	0.73
Non-Cytoplasmic	156	169	0.69
Transmembrane Helix	170	192	0.88
Cytoplasmic	193	230	0.85