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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TFR1_FELCA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDQARSAFS TLFGGEPLSY TRFSLARQVD GDNSHVEMKL AADEEENVDN NMRDNGASVT  60
   61 KPKRFNGFIC YGTIAIILFF LIGFMIGYLG YCKRVEAKSE CERPAGTESL EVEGTEPSET 120
  121 EEYFPEAPSH LFWSDLKTML SEKLSNTEFT STIRQLNENS YFPREAGSQK DESLAFFIEN 180
  181 RFRELQLSKA WHDEHFVKVQ VKGSASNSVT IVGTNSGMVY LVESPEGYVA YSKAATVTGR 240
  241 LVHANFGTKK DFENLNSPVN GSLVIVRAGK ITFAEKVANA ESFNAIGVLI YMDQAKFPIT 300
  301 NAEIPFFGHA HLGTGDPYTP GFPSFNHTQF PPSQSSGLPN IPVQTISRAN AEKLFGNMEG 360
  361 DCPSAWETDS SCRLETSRNW NVKLSVNNVL KEIRIFNVFG VIKGFEEPDH YVVVGAQRDA 420
  421 WGPGAAKSSV GTALLLELAR ILSDMVLKGG FKPSRSIVFA SWSAGDFGAV GATEWLEGYL 480
  481 SSLHLKAFTY INLDKAVLGT SNFKVSASPL LYSLIEKVMK DVKHPVTGQS LYRDSNWINK 540
  541 VEKFSLDNAA FPFLAYSGIP AVSFCFCEDT DYPYLGTTMD VYEKLIQKVP QLNKMARAAA 600
  601 EVAGQLIMKL TYDLELNLNY EMYNDKILSF VRDVSRFRAD IKEMGLNLQW LYSARGDFFR 660
  661 ATSRLTTDYR NAERTNRFIM RDINDRIMRV EYHFLSPYVS PRESPFRHIF WGTGSHTLSA 720
  721 LLEHLKLRQE NISAFNETLF RNQLALTTWT IQGAANALSG DIWDIDNEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle