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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TFR1_CANLF
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDQARSAFS TLFGGEPLSY TRFSLARQVD GDNSHVEMKL AADEEENVDN NMRGNHASVP  60
   61 KPKRCNGFIC YGTIAVVLFF LIGFMIGYLG YCKRVEPKAG CERPTGTEAL GTERTEPSET 120
  121 EEYFPETPSR LFWTDLKTML SERLSNTDFT NTMRWLNENS YVPREAGSQK DESLALLIEN 180
  181 RFREFQLSKS WRDEHFVEIQ VKSSNAQNTV TIVDMESDLV YLAESPEGYV AYSKATTVTG 240
  241 RLVHVNFGTK KDFENLKSPV NGSLVIARAG KITFAEKVAN AQSYNALGVL IYMDQARFPI 300
  301 VNARIPFFGH AHLGTGDPYT PGFPSFNHTQ FPPSQSSGLP SIPVQTISRA AAEKLFENME 360
  361 GDCPSAWEID PSCRLETSSN KNVNLTVNNV LKEIRIFNVF GVIKGFEEPD RYVVIGAQRD 420
  421 AWGPGAAKSS VGTALLLELA RIFSDMVLKG GFKPSRSIVF ASWSAGDFGA IGATEWLEGY 480
  481 LSSLHLKAFT YINLDKAILG TSNFKVSASP LLYSLLEKTM KDVKHPITGQ SLYRDSNWIN 540
  541 KVEKLSLDNA AFPFLAYSGI PAVSFCFCED TDYPYLGTTM DLYENLNQKI PQLNKMARGA 600
  601 AEVAGQLIMK LTYDLELNLN YEMYNDRILS FVRDMNQFRT DIKEMGLNLQ WLYSARGDFF 660
  661 RATSRLTTDY KNAERTNRFV MREINDRIMK VEHNFLSPYV SPRDSPFRHI FWGSGSHTLP 720
  721 ALVEHLKLRQ KNKSAFNETL LRNQLALATW TIQGAANALS GDIWDIDNEF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle